Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDHGB1Q9Y5G3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AC105917.1-201ENST00000506637 2539 ntBASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AC078925.2-201ENST00000624013 1973 ntBASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AL353719.1-201ENST00000566847 864 ntBASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AP005242.2-201ENST00000580065 1175 ntBASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 AL590326.2-201ENST00000625139 305 ntBASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDHGB1Q9Y5G3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AC046185.3-201ENST00000623228 1824 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 MMP23A-201ENST00000234610 1017 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 DDX43P3-201ENST00000441064 443 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AL355355.2-201ENST00000442321 338 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AP003041.3-201ENST00000527151 707 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AP003071.4-201ENST00000562276 1284 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 LINC02012-201ENST00000608206 1725 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 AL023803.3-201ENST00000615559 522 ntBASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDHGB1Q9Y5G3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDHGB1Q9Y5G3 AC009949.1-201ENST00000623048 1830 ntBASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms