Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 AC148477.8-201ENST00000624298 468 ntBASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 CROCCP2-202ENST00000412962 2773 ntBASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 AL135999.2-201ENST00000622438 1686 ntBASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHGC4Q9Y5F7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 MRPL3P1-201ENST00000400109 1033 ntBASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AC073648.2-201ENST00000510116 352 ntBASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AC064862.7-201ENST00000604520 867 ntBASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AC025062.2-201ENST00000605477 670 ntBASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AC139713.2-201ENST00000641328 2723 ntBASIC17.56■□□□□ 0.4
PCDHGC4Q9Y5F7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 AC097637.2-201ENST00000624096 1997 ntBASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGC4Q9Y5F7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 AC026471.1-201ENST00000564629 3026 ntBASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGC4Q9Y5F7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms