Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 IGHV3-71-201ENST00000523324 359 ntBASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC092953.2-201ENST00000608000 699 ntBASIC16.48■□□□□ 0.23
LHX6Q9UPM6 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AC010507.1-201ENST00000633895 436 ntBASIC16.48■□□□□ 0.23
LHX6Q9UPM6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 SDHAP2-201ENST00000455183 2001 ntBASIC16.48■□□□□ 0.23
LHX6Q9UPM6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.48■□□□□ 0.23
LHX6Q9UPM6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.48■□□□□ 0.23
LHX6Q9UPM6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 IGLL3P-201ENST00000412472 434 ntBASIC16.47■□□□□ 0.23
LHX6Q9UPM6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 KRT17P7-201ENST00000451704 1104 ntBASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC004817.3-201ENST00000602957 2129 ntBASIC16.47■□□□□ 0.23
LHX6Q9UPM6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC027348.2-201ENST00000624375 642 ntBASIC16.47■□□□□ 0.23
LHX6Q9UPM6 AC025048.6-201ENST00000634326 1161 ntBASIC16.47■□□□□ 0.23
LHX6Q9UPM6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LHX6Q9UPM6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LHX6Q9UPM6 PRYP5-201ENST00000451909 266 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms