Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 AC009947.1-201ENST00000444350 727 ntBASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 POLD2P1-201ENST00000511220 997 ntBASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 AC136632.2-201ENST00000512891 861 ntBASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 ZNF259P1-201ENST00000407656 1365 ntBASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HMG20BQ9P0W2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 KRT18P58-201ENST00000527480 1120 ntBASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 AL139424.1-201ENST00000607572 797 ntBASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HMG20BQ9P0W2 HCG11-201ENST00000411553 5696 ntBASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 LINC00982-205ENST00000420957 435 ntBASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 AL139327.4-201ENST00000612362 153 ntBASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 MIR1199-201ENST00000621445 119 ntBASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HMG20BQ9P0W2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.14■□□□□ 0.98
HMG20BQ9P0W2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 AL353135.1-201ENST00000606729 504 ntBASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HMG20BQ9P0W2 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms