Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 RCN1P2-201ENST00000398357 915 ntBASIC15.09■□□□□ 0.01
TREM2Q9NZC2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 KRT16P4-201ENST00000453883 522 ntBASIC15.09■□□□□ 0.01
TREM2Q9NZC2 AC009078.2-202ENST00000463353 338 ntBASIC15.09■□□□□ 0.01
TREM2Q9NZC2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 CICP6-201ENST00000457191 2729 ntBASIC15.09■□□□□ 0.01
TREM2Q9NZC2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TREM2Q9NZC2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 TP73-AS1-210ENST00000637775 1455 ntBASIC15.08■□□□□ 0.01
TREM2Q9NZC2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TREM2Q9NZC2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 AC012317.2-201ENST00000623305 2251 ntBASIC15.08■□□□□ 0
TREM2Q9NZC2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.08■□□□□ 0
TREM2Q9NZC2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.08■□□□□ 0
TREM2Q9NZC2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.08■□□□□ 0
TREM2Q9NZC2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.08■□□□□ 0
TREM2Q9NZC2 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.08■□□□□ 0
TREM2Q9NZC2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TREM2Q9NZC2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.08■□□□□ 0
TREM2Q9NZC2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.08■□□□□ 0
TREM2Q9NZC2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TREM2Q9NZC2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TREM2Q9NZC2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TREM2Q9NZC2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.07■□□□□ 0
TREM2Q9NZC2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.07■□□□□ 0
TREM2Q9NZC2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.07■□□□□ 0
TREM2Q9NZC2 AL160237.2-201ENST00000556165 472 ntBASIC15.07■□□□□ 0
TREM2Q9NZC2 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.07■□□□□ 0
TREM2Q9NZC2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.07■□□□□ 0
TREM2Q9NZC2 AL591684.3-201ENST00000605187 298 ntBASIC15.07■□□□□ 0
TREM2Q9NZC2 AC116407.2-201ENST00000613639 860 ntBASIC15.07■□□□□ 0
TREM2Q9NZC2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.07■□□□□ 0
TREM2Q9NZC2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TREM2Q9NZC2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.07■□□□□ 0
TREM2Q9NZC2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms