Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 KRT8P47-201ENST00000604727 1398 ntBASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LIN7CQ9NUP9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 AP003733.1-201ENST00000491725 852 ntBASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIN7CQ9NUP9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIN7CQ9NUP9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms