Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 AL022326.1-202ENST00000641533 845 ntBASIC18.55■□□□□ 0.56
CISHQ9NSE2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 AC106820.2-201ENST00000563775 3264 ntBASIC18.55■□□□□ 0.56
CISHQ9NSE2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CISHQ9NSE2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CISHQ9NSE2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.54■□□□□ 0.56
CISHQ9NSE2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 AC004870.1-201ENST00000315132 882 ntBASIC18.54■□□□□ 0.56
CISHQ9NSE2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 SLC25A1P3-201ENST00000395415 828 ntBASIC18.54■□□□□ 0.56
CISHQ9NSE2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 AL121912.1-201ENST00000603683 238 ntBASIC18.54■□□□□ 0.56
CISHQ9NSE2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CISHQ9NSE2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CISHQ9NSE2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 AC097637.2-201ENST00000624096 1997 ntBASIC18.53■□□□□ 0.56
CISHQ9NSE2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 AC079781.3-201ENST00000449110 356 ntBASIC18.53■□□□□ 0.56
CISHQ9NSE2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CISHQ9NSE2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CISHQ9NSE2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 AC093525.9-201ENST00000624961 1746 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CISHQ9NSE2 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 FAAHP1-202ENST00000446499 1238 ntBASIC18.52■□□□□ 0.56
CISHQ9NSE2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.52■□□□□ 0.56
CISHQ9NSE2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms