Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NECTIN3Q9NQS3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AL023806.1-201ENST00000603994 1649 ntBASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 NUS1P2-201ENST00000417358 873 ntBASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AC096582.2-201ENST00000510860 516 ntBASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AL732292.2-201ENST00000609649 430 ntBASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.72■□□□□ 0.27
NECTIN3Q9NQS3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 KRT18P55-202ENST00000578578 1546 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 TSPY19P-201ENST00000418461 509 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 POM121L3P-201ENST00000419331 1163 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 TSPY18P-201ENST00000441642 509 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC009533.2-201ENST00000543664 586 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 TP73-AS1-210ENST00000637775 1455 ntBASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NECTIN3Q9NQS3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms