Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4Q9NQC3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC015656.1-201ENST00000624209 3578 ntBASIC20.61■□□□□ 0.89
RTN4Q9NQC3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC006116.8-202ENST00000587620 1550 ntBASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.61■□□□□ 0.89
RTN4Q9NQC3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4Q9NQC3 AC099063.4-201ENST00000641099 1602 ntBASIC20.6■□□□□ 0.89
RTN4Q9NQC3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 AC126755.1-201ENST00000525846 6405 ntBASIC20.6■□□□□ 0.89
RTN4Q9NQC3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RTN4Q9NQC3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 AP003680.1-201ENST00000598970 3660 ntBASIC20.59■□□□□ 0.89
RTN4Q9NQC3 KRT8P32-201ENST00000512863 1461 ntBASIC20.59■□□□□ 0.89
RTN4Q9NQC3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTN4Q9NQC3 KRT8P11-201ENST00000409686 1436 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms