Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.72■□□□□ 0.27
SLC6A20Q9NP91 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 HNRNPDP1-201ENST00000439535 754 ntBASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SLC6A20Q9NP91 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.71■□□□□ 0.26
SLC6A20Q9NP91 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC6A20Q9NP91 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SLC6A20Q9NP91 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 RPS2P1-201ENST00000434010 821 ntBASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 AL773604.1-201ENST00000617417 272 ntBASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 CROCCP2-202ENST00000412962 2773 ntBASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SLC6A20Q9NP91 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 AF186996.4-201ENST00000467186 377 ntBASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 AP001005.1-201ENST00000571755 1248 ntBASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 AC120114.3-201ENST00000611923 658 ntBASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SLC6A20Q9NP91 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms