Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 AC068472.1-201ENST00000474589 881 ntBASIC18.35■□□□□ 0.53
CD248Q9HCU0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
CD248Q9HCU0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD248Q9HCU0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 PCDHB19P-201ENST00000570871 2371 ntBASIC18.34■□□□□ 0.53
CD248Q9HCU0 MYLKP1-201ENST00000509077 1580 ntBASIC18.34■□□□□ 0.53
CD248Q9HCU0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 BX640515.1-201ENST00000617215 977 ntBASIC18.34■□□□□ 0.53
CD248Q9HCU0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD248Q9HCU0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.34■□□□□ 0.53
CD248Q9HCU0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.33■□□□□ 0.53
CD248Q9HCU0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.33■□□□□ 0.53
CD248Q9HCU0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD248Q9HCU0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 AC023511.2-201ENST00000618803 211 ntBASIC18.33■□□□□ 0.52
CD248Q9HCU0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CD248Q9HCU0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD248Q9HCU0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 AC099343.3-201ENST00000605834 2503 ntBASIC18.32■□□□□ 0.52
CD248Q9HCU0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms