Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AL844908.2-201ENST00000609461 460 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 MYCLP2-201ENST00000449268 967 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 CTBP2P3-201ENST00000585629 1255 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AC106872.11-201ENST00000605838 421 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
CHD8Q9HCK8 AP3S2-216ENST00000617003 1561 ntBASIC15.97■□□□□ 0.15
CHD8Q9HCK8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 HMGA1P7-201ENST00000406908 502 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 MIR1247-201ENST00000408206 136 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 ZNF890P-202ENST00000530367 1156 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AL138918.1-201ENST00000568306 659 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC098850.1-201ENST00000419919 790 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 AC018529.1-201ENST00000613063 361 ntBASIC15.96■□□□□ 0.15
CHD8Q9HCK8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CHD8Q9HCK8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 AC015936.2-201ENST00000593177 259 ntBASIC15.95■□□□□ 0.14
CHD8Q9HCK8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.95■□□□□ 0.14
CHD8Q9HCK8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms