Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 NUDT16P1-203ENST00000513809 620 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC104390.1-201ENST00000555663 520 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 FAM197Y4-202ENST00000622692 608 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC112497.1-201ENST00000624824 639 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 AC079328.2-201ENST00000561241 3354 ntBASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SND1-IT1Q9HBX3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 WWOX-216ENST00000569818 525 ntBASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 GRAMD4P8-201ENST00000605465 1115 ntBASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 CR769767.2-201ENST00000622735 460 ntBASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
SND1-IT1Q9HBX3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms