Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 AC012569.1-201ENST00000591191 1524 ntBASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP4Q9C0A0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
CNTNAP4Q9C0A0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.7■■□□□ 1.07
CNTNAP4Q9C0A0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.7■■□□□ 1.06
CNTNAP4Q9C0A0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 IGHV3-42-201ENST00000520410 361 ntBASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 WASH6P-202ENST00000359512 1437 ntBASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
CNTNAP4Q9C0A0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 AC092580.3-201ENST00000430932 139 ntBASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 HLA-J-202ENST00000469281 1241 ntBASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 AC097493.3-201ENST00000509725 367 ntBASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 AC069120.2-201ENST00000524091 540 ntBASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 MIR6080-201ENST00000617359 66 ntBASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP4Q9C0A0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP4Q9C0A0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 CRB3P1-201ENST00000449338 276 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 ALG1L8P-201ENST00000533887 760 ntBASIC21.66■■□□□ 1.06
CNTNAP4Q9C0A0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms