Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 AC109462.3-201ENST00000573934 613 ntBASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRAIPQ9BWF2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 AC005104.2-201ENST00000427818 678 ntBASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 AC092865.5-201ENST00000545435 363 ntBASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 AC040169.1-201ENST00000565382 521 ntBASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 REXO1L9P-201ENST00000604264 2108 ntBASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAIPQ9BWF2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 MYCLP1-201ENST00000372451 1075 ntBASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 IGHV3-52-201ENST00000519770 353 ntBASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 AL139424.1-201ENST00000607572 797 ntBASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAIPQ9BWF2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 LINC00896-202ENST00000609602 2128 ntBASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAIPQ9BWF2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms