Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK1Q99986 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
VRK1Q99986 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
VRK1Q99986 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VRK1Q99986 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK1Q99986 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
VRK1Q99986 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
VRK1Q99986 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
VRK1Q99986 NSUN5P1-202ENST00000421140 1535 ntBASIC15.43■□□□□ 0.06
VRK1Q99986 NSUN5P2-203ENST00000457352 1529 ntBASIC15.43■□□□□ 0.06
VRK1Q99986 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.43■□□□□ 0.06
VRK1Q99986 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 AL024508.2-201ENST00000607749 1894 ntBASIC15.42■□□□□ 0.06
VRK1Q99986 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 AL118508.1-201ENST00000613502 2345 ntBASIC15.42■□□□□ 0.06
VRK1Q99986 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
VRK1Q99986 AC113404.2-201ENST00000507884 177 ntBASIC15.42■□□□□ 0.06
VRK1Q99986 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.42■□□□□ 0.06
VRK1Q99986 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.42■□□□□ 0.06
VRK1Q99986 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VRK1Q99986 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.42■□□□□ 0.06
VRK1Q99986 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.42■□□□□ 0.06
VRK1Q99986 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.42■□□□□ 0.06
VRK1Q99986 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 AC022211.2-201ENST00000585075 2527 ntBASIC15.42■□□□□ 0.06
VRK1Q99986 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.42■□□□□ 0.06
VRK1Q99986 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.42■□□□□ 0.06
VRK1Q99986 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
VRK1Q99986 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
VRK1Q99986 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
VRK1Q99986 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
VRK1Q99986 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VRK1Q99986 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 LINC00602-201ENST00000629776 2065 ntBASIC15.41■□□□□ 0.06
VRK1Q99986 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
VRK1Q99986 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 FAAHP1-202ENST00000446499 1238 ntBASIC15.41■□□□□ 0.06
VRK1Q99986 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 EMBP1-201ENST00000458200 901 ntBASIC15.41■□□□□ 0.06
VRK1Q99986 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
VRK1Q99986 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.41■□□□□ 0.06
VRK1Q99986 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.41■□□□□ 0.06
VRK1Q99986 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.41■□□□□ 0.06
VRK1Q99986 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.41■□□□□ 0.06
VRK1Q99986 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VRK1Q99986 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
VRK1Q99986 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
VRK1Q99986 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.41■□□□□ 0.06
VRK1Q99986 AC093677.2-201ENST00000600169 1863 ntBASIC15.41■□□□□ 0.06
VRK1Q99986 FLJ13224-201ENST00000313737 1514 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms