Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC011498.5-201ENST00000592027 486 ntBASIC17.07■□□□□ 0.32
NPAS2Q99743 LINC01451-201ENST00000623792 534 ntBASIC17.07■□□□□ 0.32
NPAS2Q99743 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS2Q99743 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 LINC00167-201ENST00000530583 1419 ntBASIC17.06■□□□□ 0.32
NPAS2Q99743 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 AC016734.2-201ENST00000624325 1377 ntBASIC17.06■□□□□ 0.32
NPAS2Q99743 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 ATP5G2P1-201ENST00000433580 426 ntBASIC17.06■□□□□ 0.32
NPAS2Q99743 HCG4P8-203ENST00000443049 980 ntBASIC17.06■□□□□ 0.32
NPAS2Q99743 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NPAS2Q99743 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
NPAS2Q99743 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NPAS2Q99743 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NPAS2Q99743 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 PVRIG2P-201ENST00000435460 978 ntBASIC17.05■□□□□ 0.32
NPAS2Q99743 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.05■□□□□ 0.32
NPAS2Q99743 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.05■□□□□ 0.32
NPAS2Q99743 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.05■□□□□ 0.32
NPAS2Q99743 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 AC046158.3-201ENST00000624947 2558 ntBASIC17.05■□□□□ 0.32
NPAS2Q99743 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NPAS2Q99743 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
NPAS2Q99743 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NPAS2Q99743 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 FLJ38576-201ENST00000623820 2459 ntBASIC17.05■□□□□ 0.32
NPAS2Q99743 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NPAS2Q99743 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms