Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC38A3Q99624 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC38A3Q99624 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 MIR1233-2-201ENST00000408138 82 ntBASIC16.86■□□□□ 0.29
SLC38A3Q99624 MIR1233-1-201ENST00000408722 82 ntBASIC16.86■□□□□ 0.29
SLC38A3Q99624 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 RPS15P9-201ENST00000494093 319 ntBASIC16.86■□□□□ 0.29
SLC38A3Q99624 PGAM5P1-201ENST00000518923 814 ntBASIC16.86■□□□□ 0.29
SLC38A3Q99624 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC38A3Q99624 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC38A3Q99624 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 LINC00982-205ENST00000420957 435 ntBASIC16.85■□□□□ 0.29
SLC38A3Q99624 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 AC040169.1-201ENST00000565382 521 ntBASIC16.85■□□□□ 0.29
SLC38A3Q99624 MIR4751-201ENST00000578027 74 ntBASIC16.85■□□□□ 0.29
SLC38A3Q99624 AC139530.3-201ENST00000620344 690 ntBASIC16.85■□□□□ 0.29
SLC38A3Q99624 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC38A3Q99624 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC38A3Q99624 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms