Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 KRT18P32-201ENST00000424695 1287 ntBASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.28■□□□□ 0.84
CDK5RAP2Q96SN8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 AC009093.7-201ENST00000623853 1223 ntBASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDK5RAP2Q96SN8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
CDK5RAP2Q96SN8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CDK5RAP2Q96SN8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CDK5RAP2Q96SN8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDK5RAP2Q96SN8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC004461.1-201ENST00000412461 403 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC023141.5-201ENST00000458585 616 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC027796.2-201ENST00000575326 344 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AL009183.1-201ENST00000603760 355 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 SPDYE11-202ENST00000450699 704 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 CEND1P1-201ENST00000451006 455 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 SPDYE9P-201ENST00000570642 692 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 SPDYE10P-202ENST00000612005 668 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 SPDYE8P-202ENST00000612377 668 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 FRMD8P1-201ENST00000440433 1524 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 AC093525.9-201ENST00000624961 1746 ntBASIC20.26■□□□□ 0.83
CDK5RAP2Q96SN8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 AC016396.2-201ENST00000562575 1417 ntBASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.25■□□□□ 0.83
CDK5RAP2Q96SN8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDK5RAP2Q96SN8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms