Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 ACTL9-202ENST00000612068 1252 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AC018470.1-201ENST00000624790 3129 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 RNA5SP423-201ENST00000517127 109 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AC100757.3-201ENST00000622361 1406 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 AC112492.5-201ENST00000421897 457 ntBASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 RN7SL589P-201ENST00000481268 310 ntBASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 AC092552.1-201ENST00000547243 906 ntBASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 MIR4259-201ENST00000584466 101 ntBASIC14.68□□□□□ -0.06
CSMD1Q96PZ7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 ESPNP-201ENST00000270691 2015 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 PTCHD3P3-201ENST00000403073 906 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 BCYRN1-201ENST00000418539 200 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC005237.2-201ENST00000434368 219 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC026120.1-201ENST00000611536 926 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC002056.1-201ENST00000395613 760 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 KLF4P1-201ENST00000412782 1185 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms