Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 PIN1P1-201ENST00000412108 996 ntBASIC20.18■□□□□ 0.82
CDCA5Q96FF9 COX5BP8-201ENST00000416911 349 ntBASIC20.18■□□□□ 0.82
CDCA5Q96FF9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA5Q96FF9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 AP000997.3-201ENST00000623333 2250 ntBASIC20.17■□□□□ 0.82
CDCA5Q96FF9 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 AC241585.1-201ENST00000433527 519 ntBASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.17■□□□□ 0.82
CDCA5Q96FF9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 MIR6752-201ENST00000618442 71 ntBASIC20.16■□□□□ 0.82
CDCA5Q96FF9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.16■□□□□ 0.82
CDCA5Q96FF9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms