Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.37■□□□□ 0.37
ECHDC3Q96DC8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 AC116353.5-201ENST00000638148 1699 ntBASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 BCL2-203ENST00000589955 5011 ntBASIC17.36■□□□□ 0.37
ECHDC3Q96DC8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 RPS15P9-201ENST00000494093 319 ntBASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 AC005593.1-201ENST00000624894 515 ntBASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 PP12613-201ENST00000424958 2230 ntBASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ECHDC3Q96DC8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms