Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.36■□□□□ 0.53
RNF25Q96BH1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RNF25Q96BH1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.36■□□□□ 0.53
RNF25Q96BH1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.35■□□□□ 0.53
RNF25Q96BH1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.35■□□□□ 0.53
RNF25Q96BH1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.35■□□□□ 0.53
RNF25Q96BH1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RNF25Q96BH1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TSPY22P-201ENST00000427496 604 ntBASIC18.34■□□□□ 0.53
RNF25Q96BH1 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.34■□□□□ 0.53
RNF25Q96BH1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF25Q96BH1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF25Q96BH1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF25Q96BH1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
RNF25Q96BH1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF25Q96BH1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF25Q96BH1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF25Q96BH1 PSAT1P2-201ENST00000426107 972 ntBASIC18.33■□□□□ 0.52
RNF25Q96BH1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms