Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
UBE2E3Q969T4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBE2E3Q969T4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
UBE2E3Q969T4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.75■□□□□ 0.27
UBE2E3Q969T4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.75■□□□□ 0.27
UBE2E3Q969T4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 MIR5100-201ENST00000579544 119 ntBASIC16.74■□□□□ 0.27
UBE2E3Q969T4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 FZD10-202ENST00000539839 3282 ntBASIC16.74■□□□□ 0.27
UBE2E3Q969T4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBE2E3Q969T4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 AL591684.3-201ENST00000605187 298 ntBASIC16.73■□□□□ 0.27
UBE2E3Q969T4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBE2E3Q969T4 AC132938.5-201ENST00000624980 1813 ntBASIC16.73■□□□□ 0.27
UBE2E3Q969T4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.72■□□□□ 0.27
UBE2E3Q969T4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 NUS1P2-201ENST00000417358 873 ntBASIC16.72■□□□□ 0.27
UBE2E3Q969T4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 NUS1P1-201ENST00000446295 882 ntBASIC16.72■□□□□ 0.27
UBE2E3Q969T4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2E3Q969T4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms