Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 COX5BP2-201ENST00000392354 334 ntBASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMARCE1Q969G3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCE1Q969G3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCE1Q969G3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMARCE1Q969G3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMARCE1Q969G3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AC060834.1-201ENST00000443027 2032 ntBASIC19.63■□□□□ 0.73
SMARCE1Q969G3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AC211429.1-201ENST00000415277 523 ntBASIC19.63■□□□□ 0.73
SMARCE1Q969G3 SPDYE13P-201ENST00000445314 798 ntBASIC19.63■□□□□ 0.73
SMARCE1Q969G3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.63■□□□□ 0.73
SMARCE1Q969G3 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.63■□□□□ 0.73
SMARCE1Q969G3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.62■□□□□ 0.73
SMARCE1Q969G3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms