Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.24■□□□□ 0.51
USP13Q92995 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.24■□□□□ 0.51
USP13Q92995 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.24■□□□□ 0.51
USP13Q92995 AC136632.2-201ENST00000512891 861 ntBASIC18.24■□□□□ 0.51
USP13Q92995 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.24■□□□□ 0.51
USP13Q92995 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 AC116407.2-201ENST00000613639 860 ntBASIC18.24■□□□□ 0.51
USP13Q92995 PGM5P2-202ENST00000637225 1043 ntBASIC18.24■□□□□ 0.51
USP13Q92995 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.24■□□□□ 0.51
USP13Q92995 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.24■□□□□ 0.51
USP13Q92995 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
USP13Q92995 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 FLJ13224-201ENST00000313737 1514 ntBASIC18.23■□□□□ 0.51
USP13Q92995 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
USP13Q92995 REXO1L9P-201ENST00000604264 2108 ntBASIC18.23■□□□□ 0.51
USP13Q92995 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
USP13Q92995 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.23■□□□□ 0.51
USP13Q92995 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
USP13Q92995 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.23■□□□□ 0.51
USP13Q92995 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 AC109462.3-201ENST00000573934 613 ntBASIC18.23■□□□□ 0.51
USP13Q92995 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.23■□□□□ 0.51
USP13Q92995 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP13Q92995 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP13Q92995 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP13Q92995 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
USP13Q92995 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 KLF4P1-201ENST00000412782 1185 ntBASIC18.22■□□□□ 0.51
USP13Q92995 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.22■□□□□ 0.51
USP13Q92995 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.22■□□□□ 0.51
USP13Q92995 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.22■□□□□ 0.51
USP13Q92995 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.22■□□□□ 0.51
USP13Q92995 AC004706.3-202ENST00000621574 984 ntBASIC18.22■□□□□ 0.51
USP13Q92995 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.22■□□□□ 0.51
USP13Q92995 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.22■□□□□ 0.51
USP13Q92995 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.22■□□□□ 0.51
USP13Q92995 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP13Q92995 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP13Q92995 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.21■□□□□ 0.51
USP13Q92995 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 AC003669.1-201ENST00000334569 611 ntBASIC18.21■□□□□ 0.51
USP13Q92995 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP13Q92995 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
USP13Q92995 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
USP13Q92995 AC005104.2-201ENST00000427818 678 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms