Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEMA4DQ92854 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEMA4DQ92854 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEMA4DQ92854 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SEMA4DQ92854 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SEMA4DQ92854 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SEMA4DQ92854 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
SEMA4DQ92854 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
SEMA4DQ92854 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 RBM17P3-201ENST00000417687 1192 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 FGFR3P6-201ENST00000457012 610 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 NKAPP1-205ENST00000585790 367 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 AL355877.3-201ENST00000622820 899 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 AC022211.2-201ENST00000585075 2527 ntBASIC18.7■□□□□ 0.58
SEMA4DQ92854 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA4DQ92854 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA4DQ92854 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 SIGLEC30P-201ENST00000455569 941 ntBASIC18.69■□□□□ 0.58
SEMA4DQ92854 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.69■□□□□ 0.58
SEMA4DQ92854 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA4DQ92854 AC092053.1-201ENST00000605787 1936 ntBASIC18.68■□□□□ 0.58
SEMA4DQ92854 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 HCG11-201ENST00000411553 5696 ntBASIC18.68■□□□□ 0.58
SEMA4DQ92854 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA4DQ92854 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 SART3-203ENST00000546611 1184 ntBASIC18.68■□□□□ 0.58
SEMA4DQ92854 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.68■□□□□ 0.58
SEMA4DQ92854 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms