Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CASKIN1Q8WXD9 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CASKIN1Q8WXD9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CASKIN1Q8WXD9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CASKIN1Q8WXD9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 RARRES2P8-201ENST00000566335 367 ntBASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 AL009183.1-201ENST00000603760 355 ntBASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 NOC2LP1-202ENST00000452600 2235 ntBASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 AC116353.5-201ENST00000638148 1699 ntBASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CASKIN1Q8WXD9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 GPS2P2-201ENST00000430745 888 ntBASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 CD7-202ENST00000578509 925 ntTSL 3 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC26.72■■□□□ 1.87
CASKIN1Q8WXD9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 AC079140.1-201ENST00000508039 487 ntBASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 GATB-205ENST00000508611 605 ntTSL 2 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 AC243562.1-201ENST00000560672 389 ntBASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 MIR3909-201ENST00000579518 119 ntBASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 AL353732.1-201ENST00000569618 1459 ntBASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CASKIN1Q8WXD9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC26.7■■□□□ 1.87
CASKIN1Q8WXD9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
CASKIN1Q8WXD9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC26.7■■□□□ 1.87
CASKIN1Q8WXD9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC26.7■■□□□ 1.86
CASKIN1Q8WXD9 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
CASKIN1Q8WXD9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CASKIN1Q8WXD9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms