Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 GAPDHP21-201ENST00000450301 1010 ntBASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 AC098799.1-201ENST00000504752 800 ntBASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 HTR7P1-202ENST00000624664 4411 ntBASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNIP1Q8TAD8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AC002472.2-201ENST00000442739 958 ntBASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 AC005082.1-201ENST00000413042 2259 ntBASIC16.38■□□□□ 0.21
SNIP1Q8TAD8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC020916.1-201ENST00000587762 1774 ntBASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC236430.1-201ENST00000402231 743 ntBASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC055876.3-201ENST00000431496 288 ntBASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 AC138649.4-201ENST00000612222 287 ntBASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SNIP1Q8TAD8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms