Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 SIGLEC30P-201ENST00000455569 941 ntBASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC148Q8NFR7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 FGFR3P6-201ENST00000457012 610 ntBASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 AC016396.2-201ENST00000562575 1417 ntBASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 AL356309.3-201ENST00000624132 1934 ntBASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CCDC148Q8NFR7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 AC004870.1-201ENST00000315132 882 ntBASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 SCARNA2-201ENST00000458748 420 ntBASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 AC148477.5-201ENST00000625164 1645 ntBASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC148Q8NFR7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 AF238378.1-201ENST00000526806 358 ntBASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC148Q8NFR7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms