Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 TPM4P1-201ENST00000436100 807 ntBASIC17.84■□□□□ 0.45
RTL3Q8N8U3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 MTDHP4-201ENST00000600287 670 ntBASIC17.84■□□□□ 0.45
RTL3Q8N8U3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 LETM1P2-201ENST00000597330 2178 ntBASIC17.84■□□□□ 0.45
RTL3Q8N8U3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RTL3Q8N8U3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 AL023806.1-201ENST00000603994 1649 ntBASIC17.83■□□□□ 0.45
RTL3Q8N8U3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.83■□□□□ 0.45
RTL3Q8N8U3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC097637.2-201ENST00000624096 1997 ntBASIC17.83■□□□□ 0.44
RTL3Q8N8U3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC104692.2-201ENST00000603054 253 ntBASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC025062.2-201ENST00000605477 670 ntBASIC17.83■□□□□ 0.44
RTL3Q8N8U3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 AC116353.5-201ENST00000638148 1699 ntBASIC17.83■□□□□ 0.44
RTL3Q8N8U3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.83■□□□□ 0.44
RTL3Q8N8U3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 ACTG1P4-201ENST00000425123 1122 ntBASIC17.82■□□□□ 0.44
RTL3Q8N8U3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 AL160237.2-201ENST00000556165 472 ntBASIC17.82■□□□□ 0.44
RTL3Q8N8U3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RTL3Q8N8U3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms