Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 KRT18P22-201ENST00000402024 1347 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 IGHGP-201ENST00000390555 1178 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLC25A1P3-201ENST00000395415 828 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AC068472.1-201ENST00000474589 881 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AP002490.2-201ENST00000524791 560 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 AC140113.3-201ENST00000605663 199 ntBASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC01561Q8N1V8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 KRT8P9-201ENST00000558927 1449 ntBASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AL138966.2-201ENST00000621997 464 ntBASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC01561Q8N1V8 AC046185.3-201ENST00000623228 1824 ntBASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.71□□□□□ -0.54
LINC01561Q8N1V8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms