Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 TSPY16P-201ENST00000449843 468 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 AC009113.1-201ENST00000570267 2443 ntBASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL27A1Q8IZC6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 AC125807.1-201ENST00000483097 614 ntBASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 AC069120.2-201ENST00000524091 540 ntBASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 AL161645.1-201ENST00000622716 1255 ntBASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
COL27A1Q8IZC6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 CRB3P1-201ENST00000449338 276 ntBASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 AP000842.3-202ENST00000569238 1080 ntBASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 MIR6080-201ENST00000617359 66 ntBASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.18■□□□□ 0.18
COL27A1Q8IZC6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 TSSK5P-201ENST00000423978 907 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 HLA-J-202ENST00000469281 1241 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AC004890.2-204ENST00000481968 304 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 MEIS3P1-201ENST00000495167 958 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AF228730.6-201ENST00000641497 218 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AC084121.3-201ENST00000641716 218 ntBASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AC105233.6-201ENST00000642093 218 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms