Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC016396.2-201ENST00000562575 1417 ntBASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 BX276092.5-203ENST00000456199 560 ntBASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 AL138831.2-201ENST00000606564 490 ntBASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 AC019129.2-201ENST00000609837 1235 ntBASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AC091607.1-201ENST00000490318 1060 ntBASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 IGHV3-52-201ENST00000519770 353 ntBASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 AL121672.3-201ENST00000608644 468 ntBASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.42■□□□□ 0.06
LINC00346Q8IVM7 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC011676.5-201ENST00000624864 2660 ntBASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 NKILA-202ENST00000614771 2598 ntBASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LINC00346Q8IVM7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms