Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SPTSSB-204ENST00000617024 1292 ntBASIC11.99□□□□□ -0.49
CSMD3Q7Z407 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 AC100757.3-201ENST00000622361 1406 ntBASIC11.99□□□□□ -0.49
CSMD3Q7Z407 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ACTG1P4-201ENST00000425123 1122 ntBASIC11.99□□□□□ -0.49
CSMD3Q7Z407 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 FAM86C2P-203ENST00000528684 1004 ntBASIC11.98□□□□□ -0.49
CSMD3Q7Z407 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 TSSK5P-201ENST00000423978 907 ntBASIC11.98□□□□□ -0.49
CSMD3Q7Z407 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 RARRES2P8-201ENST00000566335 367 ntBASIC11.98□□□□□ -0.49
CSMD3Q7Z407 AP000842.3-202ENST00000569238 1080 ntBASIC11.98□□□□□ -0.49
CSMD3Q7Z407 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CSMD3Q7Z407 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD3Q7Z407 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms