Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 MIR3909-201ENST00000579518 119 ntBASIC17.72■□□□□ 0.43
DENND4AQ7Z401 AC138028.4-201ENST00000564984 1845 ntBASIC17.72■□□□□ 0.43
DENND4AQ7Z401 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DENND4AQ7Z401 AC009113.1-201ENST00000570267 2443 ntBASIC17.72■□□□□ 0.43
DENND4AQ7Z401 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 AC026150.2-201ENST00000564693 1156 ntBASIC17.71■□□□□ 0.43
DENND4AQ7Z401 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 AL161645.1-201ENST00000622716 1255 ntBASIC17.71■□□□□ 0.43
DENND4AQ7Z401 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 BICD1-207ENST00000551848 1962 ntBASIC17.71■□□□□ 0.43
DENND4AQ7Z401 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 MIR943-201ENST00000401286 94 ntBASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SPDYE7P-202ENST00000420373 878 ntBASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DENND4AQ7Z401 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.71■□□□□ 0.42
DENND4AQ7Z401 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DENND4AQ7Z401 WASH6P-202ENST00000359512 1437 ntBASIC17.71■□□□□ 0.42
DENND4AQ7Z401 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 REXO1L9P-201ENST00000604264 2108 ntBASIC17.7■□□□□ 0.42
DENND4AQ7Z401 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 AL671277.1-201ENST00000429656 993 ntBASIC17.7■□□□□ 0.42
DENND4AQ7Z401 GAPDHP21-201ENST00000450301 1010 ntBASIC17.7■□□□□ 0.42
DENND4AQ7Z401 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 MIR4515-201ENST00000584082 81 ntBASIC17.7■□□□□ 0.42
DENND4AQ7Z401 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.7■□□□□ 0.42
DENND4AQ7Z401 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 BASP1P1-201ENST00000430708 665 ntBASIC17.69■□□□□ 0.42
DENND4AQ7Z401 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 AC004890.2-204ENST00000481968 304 ntBASIC17.69■□□□□ 0.42
DENND4AQ7Z401 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DENND4AQ7Z401 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms