Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 SPDYE13P-201ENST00000445314 798 ntBASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 AL136038.3-201ENST00000561909 1096 ntBASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 AL049597.2-201ENST00000565575 961 ntBASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HIST3H2AQ7L7L0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 COX5BP2-201ENST00000392354 334 ntBASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 AC005104.2-201ENST00000427818 678 ntBASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 AC016396.2-201ENST00000562575 1417 ntBASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST3H2AQ7L7L0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.14
HIST3H2AQ7L7L0 AL139384.1-201ENST00000612143 3047 ntBASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 IGHV3-52-201ENST00000519770 353 ntBASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 KRT8P26-201ENST00000534154 1276 ntBASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST3H2AQ7L7L0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms