Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 AP002414.4-201ENST00000589764 1148 ntBASIC15.87■□□□□ 0.13
NIPAL3Q6P499 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.87■□□□□ 0.13
NIPAL3Q6P499 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 AC016396.2-201ENST00000562575 1417 ntBASIC15.86■□□□□ 0.13
NIPAL3Q6P499 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 AC106886.4-201ENST00000623557 2502 ntBASIC15.86■□□□□ 0.13
NIPAL3Q6P499 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 VENTXP7-201ENST00000475503 772 ntBASIC15.86■□□□□ 0.13
NIPAL3Q6P499 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
NIPAL3Q6P499 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 LYSMD4-203ENST00000378904 2122 ntBASIC15.85■□□□□ 0.13
NIPAL3Q6P499 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 AP002383.4-201ENST00000442518 975 ntBASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.85■□□□□ 0.13
NIPAL3Q6P499 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 AC060834.1-201ENST00000443027 2032 ntBASIC15.85■□□□□ 0.13
NIPAL3Q6P499 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NIPAL3Q6P499 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms