Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SWSAP1Q6NVH7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 AL805961.1-202ENST00000641562 540 ntBASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SWSAP1Q6NVH7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SWSAP1Q6NVH7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SWSAP1Q6NVH7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.33■□□□□ 0.69
SWSAP1Q6NVH7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SWSAP1Q6NVH7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.33■□□□□ 0.69
SWSAP1Q6NVH7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SWSAP1Q6NVH7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 AP002414.1-201ENST00000391405 1147 ntBASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SWSAP1Q6NVH7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SWSAP1Q6NVH7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms