Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TFAMP1-201ENST00000412727 736 ntBASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 AC069335.1-201ENST00000489972 472 ntBASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LYSMD4Q5XG99 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 KRT18P55-202ENST00000578578 1546 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 MIR943-201ENST00000401286 94 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AC055876.3-201ENST00000431496 288 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AL135744.1-201ENST00000565098 629 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 RARRES2P8-201ENST00000566335 367 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AC051619.7-201ENST00000568314 623 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AC138649.4-201ENST00000612222 287 ntBASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LYSMD4Q5XG99 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 TUBB3P1-201ENST00000405796 1332 ntBASIC16.96■□□□□ 0.3
LYSMD4Q5XG99 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AL512356.2-201ENST00000546955 174 ntBASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AP001059.3-201ENST00000619053 235 ntBASIC16.95■□□□□ 0.3
LYSMD4Q5XG99 AF228730.6-201ENST00000641497 218 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms