Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 AP001094.4-201ENST00000579008 2176 ntBASIC16.19■□□□□ 0.18
PRICKLE4Q2TBC4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 ACTG1P4-201ENST00000425123 1122 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 AL450487.1-201ENST00000426799 995 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 EMBP1-201ENST00000458200 901 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SART3-203ENST00000546611 1184 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 AL022326.1-202ENST00000641533 845 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 AC097637.2-201ENST00000624096 1997 ntBASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PRICKLE4Q2TBC4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SCARNA2-201ENST00000458748 420 ntBASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PRICKLE4Q2TBC4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 KRT126P-201ENST00000549467 1181 ntBASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.16■□□□□ 0.18
PRICKLE4Q2TBC4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms