Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2B3Q16720 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2B3Q16720 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.31■■□□□ 1
ATP2B3Q16720 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
ATP2B3Q16720 AL135999.2-201ENST00000622438 1686 ntBASIC21.31■■□□□ 1
ATP2B3Q16720 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.31■■□□□ 1
ATP2B3Q16720 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 AC108751.1-201ENST00000490852 363 ntBASIC21.31■■□□□ 1
ATP2B3Q16720 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
ATP2B3Q16720 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.31■■□□□ 1
ATP2B3Q16720 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
ATP2B3Q16720 TERC-201ENST00000602385 541 ntBASIC21.31■■□□□ 1
ATP2B3Q16720 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.31■■□□□ 1
ATP2B3Q16720 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.31■■□□□ 1
ATP2B3Q16720 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATP2B3Q16720 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2B3Q16720 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 MED15P5-201ENST00000423150 992 ntBASIC21.3■■□□□ 1
ATP2B3Q16720 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 RPS15P9-201ENST00000494093 319 ntBASIC21.3■■□□□ 1
ATP2B3Q16720 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
ATP2B3Q16720 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.3■■□□□ 1
ATP2B3Q16720 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP2B3Q16720 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 LYSMD4-203ENST00000378904 2122 ntBASIC21.29■■□□□ 1
ATP2B3Q16720 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 GPR89P-201ENST00000407924 1495 ntBASIC21.29■■□□□ 1
ATP2B3Q16720 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 ACTG1P4-201ENST00000425123 1122 ntBASIC21.29■■□□□ 1
ATP2B3Q16720 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.29■■□□□ 1
ATP2B3Q16720 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP2B3Q16720 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP2B3Q16720 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATP2B3Q16720 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.29■■□□□ 1
ATP2B3Q16720 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.28■■□□□ 1
ATP2B3Q16720 AC133963.1-201ENST00000504166 1679 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.28■■□□□ 1
ATP2B3Q16720 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
ATP2B3Q16720 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.28■■□□□ 1
ATP2B3Q16720 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.28■■□□□ 1
ATP2B3Q16720 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP2B3Q16720 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 AC007967.2-201ENST00000432613 625 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 AC108073.2-201ENST00000464002 357 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.28■■□□□ 1
ATP2B3Q16720 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ATP2B3Q16720 FAM197Y3-203ENST00000618346 717 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 AL805961.1-202ENST00000641562 540 ntBASIC21.28■■□□□ 1
ATP2B3Q16720 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ATP2B3Q16720 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.28■■□□□ 1
ATP2B3Q16720 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.28■■□□□ 1
ATP2B3Q16720 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms