Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH17Q12864 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 AC003669.1-201ENST00000334569 611 ntBASIC17.6■□□□□ 0.41
CDH17Q12864 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CDH17Q12864 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CDH17Q12864 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.6■□□□□ 0.41
CDH17Q12864 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CDH17Q12864 STK19B-204ENST00000512515 211 ntBASIC17.6■□□□□ 0.41
CDH17Q12864 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.6■□□□□ 0.41
CDH17Q12864 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.6■□□□□ 0.41
CDH17Q12864 BNIP3P18-201ENST00000593976 575 ntBASIC17.6■□□□□ 0.41
CDH17Q12864 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.6■□□□□ 0.41
CDH17Q12864 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 AD001527.2-201ENST00000622994 785 ntBASIC17.6■□□□□ 0.41
CDH17Q12864 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.6■□□□□ 0.41
CDH17Q12864 INTS4P1-201ENST00000438455 1935 ntBASIC17.6■□□□□ 0.41
CDH17Q12864 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.6■□□□□ 0.41
CDH17Q12864 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDH17Q12864 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDH17Q12864 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH17Q12864 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 AC009336.1-201ENST00000608941 1553 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 AC096582.2-201ENST00000510860 516 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 AC074051.2-201ENST00000565115 352 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 MIR3180-1-201ENST00000580374 94 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 MIR3180-3-201ENST00000584616 94 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 NPAP1P7-201ENST00000613027 823 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 AC009053.2-201ENST00000563701 2365 ntBASIC17.59■□□□□ 0.41
CDH17Q12864 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH17Q12864 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDH17Q12864 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH17Q12864 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 LINC02012-201ENST00000608206 1725 ntBASIC17.58■□□□□ 0.41
CDH17Q12864 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH17Q12864 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CDH17Q12864 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH17Q12864 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH17Q12864 SLC25A1P3-201ENST00000395415 828 ntBASIC17.58■□□□□ 0.4
CDH17Q12864 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms