Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.22□□□□□ -0.13
SPCS3P61009 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.22□□□□□ -0.13
SPCS3P61009 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 AL157888.1-201ENST00000631930 593 ntBASIC14.22□□□□□ -0.13
SPCS3P61009 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
SPCS3P61009 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SPCS3P61009 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SPCS3P61009 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPCS3P61009 KRT8P47-201ENST00000604727 1398 ntBASIC14.22□□□□□ -0.13
SPCS3P61009 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 BX276092.7-203ENST00000637198 1536 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.21□□□□□ -0.13
SPCS3P61009 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SPCS3P61009 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 HMGA1P5-201ENST00000412453 271 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 AC008550.1-201ENST00000511500 884 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SPCS3P61009 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SPCS3P61009 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.21□□□□□ -0.13
SPCS3P61009 AC024563.2-201ENST00000603282 481 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 AL122018.1-201ENST00000446607 2310 ntBASIC14.21□□□□□ -0.13
SPCS3P61009 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
SPCS3P61009 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPCS3P61009 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.21□□□□□ -0.14
SPCS3P61009 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.21□□□□□ -0.14
SPCS3P61009 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.21□□□□□ -0.14
SPCS3P61009 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.21□□□□□ -0.14
SPCS3P61009 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SPCS3P61009 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 INGX-201ENST00000359239 846 ntBASIC14.2□□□□□ -0.14
SPCS3P61009 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.2□□□□□ -0.14
SPCS3P61009 NAPSB-206ENST00000562112 1266 ntBASIC14.2□□□□□ -0.14
SPCS3P61009 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.2□□□□□ -0.14
SPCS3P61009 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.2□□□□□ -0.14
SPCS3P61009 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.2□□□□□ -0.14
SPCS3P61009 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPCS3P61009 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.2□□□□□ -0.14
SPCS3P61009 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SPCS3P61009 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms