Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 FAM220CP-201ENST00000395253 831 ntBASIC16.57■□□□□ 0.24
CLDN8P56748 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN8P56748 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN8P56748 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
CLDN8P56748 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN8P56748 AC124947.2-201ENST00000547118 1133 ntBASIC16.57■□□□□ 0.24
CLDN8P56748 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN8P56748 LINC01238-205ENST00000567549 1107 ntBASIC16.57■□□□□ 0.24
CLDN8P56748 AC011840.4-201ENST00000578471 627 ntBASIC16.57■□□□□ 0.24
CLDN8P56748 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN8P56748 IGHV3-41-201ENST00000613121 348 ntBASIC16.57■□□□□ 0.24
CLDN8P56748 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLDN8P56748 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN8P56748 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN8P56748 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLDN8P56748 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN8P56748 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN8P56748 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN8P56748 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN8P56748 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN8P56748 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN8P56748 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN8P56748 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN8P56748 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.56■□□□□ 0.24
CLDN8P56748 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CLDN8P56748 STK25P1-201ENST00000585406 838 ntBASIC16.56■□□□□ 0.24
CLDN8P56748 AC011498.5-201ENST00000592027 486 ntBASIC16.56■□□□□ 0.24
CLDN8P56748 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLDN8P56748 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN8P56748 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN8P56748 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CLDN8P56748 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN8P56748 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN8P56748 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CLDN8P56748 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN8P56748 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN8P56748 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN8P56748 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CLDN8P56748 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CLDN8P56748 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CLDN8P56748 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN8P56748 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CLDN8P56748 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 FLJ38576-201ENST00000623820 2459 ntBASIC16.55■□□□□ 0.24
CLDN8P56748 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN8P56748 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN8P56748 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN8P56748 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN8P56748 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN8P56748 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms