Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 AC116353.5-201ENST00000638148 1699 ntBASIC17.57■□□□□ 0.4
LIMK2P53671 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LIMK2P53671 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.57■□□□□ 0.4
LIMK2P53671 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
LIMK2P53671 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
LIMK2P53671 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK2P53671 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.56■□□□□ 0.4
LIMK2P53671 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.56■□□□□ 0.4
LIMK2P53671 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 AC104692.2-201ENST00000603054 253 ntBASIC17.56■□□□□ 0.4
LIMK2P53671 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.56■□□□□ 0.4
LIMK2P53671 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.56■□□□□ 0.4
LIMK2P53671 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
LIMK2P53671 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.56■□□□□ 0.4
LIMK2P53671 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LIMK2P53671 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
LIMK2P53671 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LIMK2P53671 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
LIMK2P53671 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK2P53671 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK2P53671 AL160237.2-201ENST00000556165 472 ntBASIC17.55■□□□□ 0.4
LIMK2P53671 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.55■□□□□ 0.4
LIMK2P53671 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.55■□□□□ 0.4
LIMK2P53671 AC011840.4-201ENST00000578471 627 ntBASIC17.55■□□□□ 0.4
LIMK2P53671 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LIMK2P53671 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 NSUN5P1-202ENST00000421140 1535 ntBASIC17.55■□□□□ 0.4
LIMK2P53671 NSUN5P2-203ENST00000457352 1529 ntBASIC17.55■□□□□ 0.4
LIMK2P53671 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LIMK2P53671 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LIMK2P53671 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.54■□□□□ 0.4
LIMK2P53671 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.54■□□□□ 0.4
LIMK2P53671 AC002558.1-201ENST00000488906 803 ntBASIC17.54■□□□□ 0.4
LIMK2P53671 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LIMK2P53671 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.54■□□□□ 0.4
LIMK2P53671 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms