Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC079328.2-201ENST00000561241 3354 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 AC233702.3-201ENST00000578656 1387 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
RNF144AP50876 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.21■□□□□ 0.19
RNF144AP50876 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RNF144AP50876 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF144AP50876 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF144AP50876 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RNF144AP50876 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF144AP50876 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF144AP50876 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
RNF144AP50876 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF144AP50876 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF144AP50876 AL138831.2-201ENST00000606564 490 ntBASIC16.21■□□□□ 0.19
RNF144AP50876 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF144AP50876 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF144AP50876 AC124067.4-201ENST00000519691 2379 ntBASIC16.21■□□□□ 0.19
RNF144AP50876 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RNF144AP50876 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.21■□□□□ 0.18
RNF144AP50876 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.21■□□□□ 0.18
RNF144AP50876 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 AC096633.1-201ENST00000422446 749 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 MINOS1P3-201ENST00000457048 203 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF144AP50876 AC096582.2-201ENST00000510860 516 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 AC109462.3-201ENST00000573934 613 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.2■□□□□ 0.18
RNF144AP50876 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.2■□□□□ 0.18
RNF144AP50876 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 NPAP1P7-201ENST00000613027 823 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF144AP50876 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 AC022211.2-201ENST00000585075 2527 ntBASIC16.2■□□□□ 0.18
RNF144AP50876 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF144AP50876 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.2■□□□□ 0.18
RNF144AP50876 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF144AP50876 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF144AP50876 NSUN5P1-202ENST00000421140 1535 ntBASIC16.19■□□□□ 0.18
RNF144AP50876 NSUN5P2-203ENST00000457352 1529 ntBASIC16.19■□□□□ 0.18
RNF144AP50876 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF144AP50876 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms