Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.47■□□□□ 0.23
KNTC1P50748 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.47■□□□□ 0.23
KNTC1P50748 AL135744.1-201ENST00000565098 629 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 LINC02560-201ENST00000596379 459 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KNTC1P50748 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KNTC1P50748 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
KNTC1P50748 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.47■□□□□ 0.23
KNTC1P50748 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.47■□□□□ 0.23
KNTC1P50748 DUX4L17-201ENST00000557360 1267 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.47■□□□□ 0.23
KNTC1P50748 REXO1L3P-201ENST00000622202 1288 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 REXO1L11P-201ENST00000620964 1927 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.47■□□□□ 0.23
KNTC1P50748 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 AC008677.1-201ENST00000519230 1561 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
KNTC1P50748 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 AC135776.1-201ENST00000319817 2481 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
KNTC1P50748 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.47■□□□□ 0.23
KNTC1P50748 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
KNTC1P50748 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.46■□□□□ 0.23
KNTC1P50748 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.46■□□□□ 0.23
KNTC1P50748 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.46■□□□□ 0.23
KNTC1P50748 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.46■□□□□ 0.23
KNTC1P50748 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.46■□□□□ 0.23
KNTC1P50748 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.46■□□□□ 0.23
KNTC1P50748 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.46■□□□□ 0.23
KNTC1P50748 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.46■□□□□ 0.23
KNTC1P50748 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KNTC1P50748 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
KNTC1P50748 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KNTC1P50748 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
KNTC1P50748 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KNTC1P50748 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
KNTC1P50748 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.45■□□□□ 0.22
KNTC1P50748 AL020996.1-203ENST00000536896 2307 ntBASIC16.45■□□□□ 0.22
KNTC1P50748 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
KNTC1P50748 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.45■□□□□ 0.22
KNTC1P50748 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.45■□□□□ 0.22
KNTC1P50748 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 KRT8P48-201ENST00000515599 1220 ntBASIC16.45■□□□□ 0.22
KNTC1P50748 AC243562.1-201ENST00000560672 389 ntBASIC16.45■□□□□ 0.22
KNTC1P50748 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
KNTC1P50748 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.45■□□□□ 0.22
KNTC1P50748 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.45■□□□□ 0.22
KNTC1P50748 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KNTC1P50748 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms