Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AL359736.2-201ENST00000621992 437 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.3□□□□□ -0.12
NKX2-1P43699 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 AC079328.2-201ENST00000561241 3354 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 AL135905.2-201ENST00000584934 1404 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 BX276092.7-203ENST00000637198 1536 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 LINC02012-201ENST00000608206 1725 ntBASIC14.29□□□□□ -0.12
NKX2-1P43699 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-1P43699 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-1P43699 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-1P43699 NUDT16P1-203ENST00000513809 620 ntBASIC14.29□□□□□ -0.12
NKX2-1P43699 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-1P43699 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 TSPY26P-202ENST00000565928 3884 ntBASIC14.29□□□□□ -0.12
NKX2-1P43699 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.29□□□□□ -0.12
NKX2-1P43699 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NKX2-1P43699 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.29□□□□□ -0.12
NKX2-1P43699 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NKX2-1P43699 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NKX2-1P43699 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.28□□□□□ -0.12
NKX2-1P43699 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NKX2-1P43699 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
NKX2-1P43699 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NKX2-1P43699 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms