Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTTP42858 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.33■□□□□ 0.69
HTTP42858 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.33■□□□□ 0.69
HTTP42858 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HTTP42858 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTTP42858 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTTP42858 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HTTP42858 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.33■□□□□ 0.68
HTTP42858 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.33■□□□□ 0.68
HTTP42858 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HTTP42858 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HTTP42858 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.33■□□□□ 0.68
HTTP42858 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.33■□□□□ 0.68
HTTP42858 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.33■□□□□ 0.68
HTTP42858 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.33■□□□□ 0.68
HTTP42858 MIR6787-201ENST00000616675 61 ntBASIC19.33■□□□□ 0.68
HTTP42858 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HTTP42858 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HTTP42858 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.33■□□□□ 0.68
HTTP42858 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 AC073592.3-201ENST00000625118 1834 ntBASIC19.32■□□□□ 0.68
HTTP42858 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.32■□□□□ 0.68
HTTP42858 AL512638.1-201ENST00000457493 794 ntBASIC19.32■□□□□ 0.68
HTTP42858 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.32■□□□□ 0.68
HTTP42858 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.32■□□□□ 0.68
HTTP42858 SNX29P1-201ENST00000548357 1007 ntBASIC19.32■□□□□ 0.68
HTTP42858 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
HTTP42858 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 AC104794.3-201ENST00000566840 1248 ntBASIC19.32■□□□□ 0.68
HTTP42858 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HTTP42858 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.32■□□□□ 0.68
HTTP42858 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HTTP42858 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.31■□□□□ 0.68
HTTP42858 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.31■□□□□ 0.68
HTTP42858 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.31■□□□□ 0.68
HTTP42858 AL009183.1-201ENST00000603760 355 ntBASIC19.31■□□□□ 0.68
HTTP42858 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HTTP42858 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HTTP42858 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HTTP42858 MYCLP1-201ENST00000372451 1075 ntBASIC19.31■□□□□ 0.68
HTTP42858 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.31■□□□□ 0.68
HTTP42858 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HTTP42858 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.31■□□□□ 0.68
HTTP42858 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.31■□□□□ 0.68
HTTP42858 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 AL031598.1-201ENST00000561511 1773 ntBASIC19.31■□□□□ 0.68
HTTP42858 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HTTP42858 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
HTTP42858 AC112492.5-201ENST00000421897 457 ntBASIC19.31■□□□□ 0.68
HTTP42858 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.31■□□□□ 0.68
HTTP42858 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.31■□□□□ 0.68
HTTP42858 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 WASH6P-202ENST00000359512 1437 ntBASIC19.3■□□□□ 0.68
HTTP42858 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.3■□□□□ 0.68
HTTP42858 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.3■□□□□ 0.68
HTTP42858 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.3■□□□□ 0.68
HTTP42858 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.3■□□□□ 0.68
HTTP42858 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.3■□□□□ 0.68
HTTP42858 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.3■□□□□ 0.68
HTTP42858 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.3■□□□□ 0.68
HTTP42858 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
HTTP42858 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.3■□□□□ 0.68
HTTP42858 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.3■□□□□ 0.68
HTTP42858 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HTTP42858 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms